john-okeefe 284486f0a0 docs: add progress, notes, and highlights API endpoints ...

Phase 2 part 4: Split reading progress and annotation endpoints
- Progress: get_progress, update_progress, delete_progress
- Notes: get_notes, create_note, update_note, delete_note
- Highlights: get_highlights, create_highlight, update_highlight, delete_highlight
- All endpoints support EPUB CFI and percentage locations

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delete_progress.md

docs: add progress, notes, and highlights API endpoints

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get_progress.md

docs: add progress, notes, and highlights API endpoints

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update_progress.md

docs: add progress, notes, and highlights API endpoints

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